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胃癌细胞中DPC4基因失活与启动子区 的突变

Inactivation and Promoter Mutation of DPC4 Gene in Gastric Cancer

  • 摘要: 目的研究胃癌细胞系中DPC4基因表达和启动子区域的突变情况,并分析了两者之间的关系。方法采用RT-PCR法检测9种胃癌细胞系中DPC4基因的表达情况;克隆和测序DPC4启动子区域的突变情况;应用TFSEARCH ver.1.3软件分析DPC4启动子区域的转录因子结合位点。结果DPC4在SNU5、SNU16、SNU484、SNU638和KATOⅢ细胞中表达较高,而在SNU216、MKN28、MKN74 和 AGS细胞中表达较低或缺失。测序结果表明,MKN74细胞DPC4启动子区域出现了两处碱基置换突变,而在其它8种细胞系中没有发现突变。两处突变可能会影响转录因子MZF-1和IK-2与DPC4启动子的结合。结论DPC4基因在胃癌中频繁发生失活,而其启动子区域的突变可能是导致其失活的原因之一。

     

    Abstract: To investigate the expression level and the mutation status in promoter region of DPC4 gene in gastric cancer, and to analyze the relationship between mutation and expression of DPC4 gene. Methods Using RT-PCR method, we measured the expression of DPC4 in nine gastric cancer cell lines. Cloning and sequencing were performed for detecting the mutation status of DPC4 promoter region. In addition, we used TFSEARCH ver.1.3 to analyze transcription factor binding sites in DPC4 promoter region. Results We found that DPC4 expressed at middle to high level in SNU5, SNU16, SNU484, SNU638 and KATOⅢ cell lines, but low or absent in SNU216, MKN28, MKN74 and AGS cell lines. Sequencing data showed that, except MKN74 cells, there was no mutation of DPC4 promoter region in eight cell lines. There were two substitution mutations of DPC4 promoter region in MKN74 cells. More importantly, we found two mutations might interfere with transcription factors, including MZF-1 and IK-2, to bind to DPC4 promoter. Conclusion Inactivation of DPC4 gene is a frequent event in gastric cancer, and promoter mutation might be one of the inactivation mechanisms of DPC4 gene.

     

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